Projects per year
Organization profile
Organization profile
Computational biology can be defined as a transdisciplinary research field that uses fundamentals from mathematics, physics, chemistry and biology to produce computational models for the study of various biological phenomena. Like any scientific discipline based on data (big data), its advances are strongly linked to the development of computational sciences, particularly in the area of high performance computing (HPC).
Today, computational biology incorporates a variety of fields including, among others, genomics and bioinformatics, molecular modeling and simulation, network theory, machine learning and artificial intelligence, and population dynamics.
The Program places special emphasis on transdisciplinarity, and from this approach seeks to study and provide solutions to problems in the life sciences, social sciences and exact sciences.
In addition to the laboratories of the Science and Life Foundation, it offers the possibility of interacting and carrying out their theses in the research laboratories of some of the biotechnology companies located on our campuses.
During their time in the Program, students will acquire skills that will allow them to identify important questions in the most basic aspects of the disciplines as well as in their medical and environmental applications, formulate and develop research projects, critically read scientific literature, effectively communicate their own findings and ideas, and insert themselves in academia, as well as in the public and private sectors.
The PhD program in Computational Biology is framed within the following lines of research:
- Computational Neuroscience, Data Science and Artificial Intelligence.
- Computational biophysics of macromolecular systems.
- Genomic biology, bioinformatics and biological networks.
Organization profile
Computational biology can be defined as a transdisciplinary research field that uses fundamentals from mathematics, physics, chemistry and biology to produce computational models for the study of various biological phenomena. Like any scientific discipline based on data (big data), its advances are strongly linked to the development of computational sciences, particularly in the area of high performance computing (HPC).
Today, computational biology incorporates a variety of fields including, among others, genomics and bioinformatics, molecular modeling and simulation, network theory, machine learning and artificial intelligence, and population dynamics.
The Program places special emphasis on transdisciplinarity, and from this approach seeks to study and provide solutions to problems in the life sciences, social sciences and exact sciences.
In addition to the laboratories of the Science and Life Foundation, it offers the possibility of interacting and carrying out their theses in the research laboratories of some of the biotechnology companies located on our campuses.
During their time in the Program, students will acquire skills that will allow them to identify important questions in the most basic aspects of the disciplines as well as in their medical and environmental applications, formulate and develop research projects, critically read scientific literature, effectively communicate their own findings and ideas, and insert themselves in academia, as well as in the public and private sectors.
The PhD program in Computational Biology is framed within the following lines of research:
- Computational Neuroscience, Data Science and Artificial Intelligence.
- Computational biophysics of macromolecular systems.
- Genomic biology, bioinformatics and biological networks.
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Collaborations and top research areas from the last five years
Profiles
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Carlos Andrés Aguirre Núñez, PhD
- Universidad San Sebastián - Investigador
- Facultad de Arquitectura, Arte y Diseño - Investigador
- Sede Santiago - Investigador
- Doctorado en Biología Computacional - Investigador
Person: Researcher
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Raul René Araya Secchi, PhD
- Universidad San Sebastián - Investigador
- Facultad de Ingeniería - Investigador
- Sede Santiago - Investigador
- Magíster en Biomedicina Molecular - Investigador
- Doctorado en Ingeniería - Investigador
- Doctorado en Biología Computacional - Investigador
- Doctorado en Biología Celular y Biomedicina - Investigador
Person: Researcher
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Pablo Antonio Coelho Caro, PhD
- Universidad San Sebastián - Investigador
- Facultad de Ingeniería - Investigador
- Sede Concepción - Investigador
- Magíster en Innovación en Biociencias y Bioingeniería - Investigador
- Doctorado en Ingeniería - Investigador
- Doctorado en Biología Computacional - Investigador
Person: Researcher
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FONDECYT E-13240042: Collective Mind: from computational modeling to computational sociology. Unveiling the Role of Self and Situational Awareness in Agent-Based Systems (ABSs).
Perez Acle, T. O. (Investigador(a) Responsable), Otero Ferreiro, M. (Deputy director), Martín Martín, A. J. (CoI), Alfaro, P. (CoI) & Olivi, A. (CoI)
03/11/24 → 02/11/28
Project: PROYECTO DE INVESTIGACIÓN
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FONDEF-IT24I0064: Automatización de Certificaciones de Miel basada en IA y Cloud Computing para Visualización de datos desde el laboratorio al consumidor
Coelho Caro, P. A. (Investigador(a) Patrocinante), Staforelli Vivanco, J. P. (Investigador(a) Responsable), Rondanelli-Reyes, M. (CoI), Obregón Rivas, A. M. (CoI) & Jara Chávez, A. G. A. (CoI)
01/10/24 → 30/09/26
Project: PROYECTO DE INVESTIGACIÓN APLICADA
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FONDECYT R-1241695: NETWORK CONTROL MODEL AND OPTIMIZATION OF NON-INVASIVE ELECTRIC BRAIN STIMULATION FOR THE REHABILITATION OF CORTICAL LESIONS
Otero Ferreiro, M. (CoI), El-Deredy, W. (Investigador(a) Responsable), Billeke, P. (CoI) & Weinstein, A. (CoI)
Agencia Nacional de Investigaci?n y Desarrollo
01/04/24 → 31/03/28
Project: PROYECTO DE INVESTIGACIÓN
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A complex multisystem disorder including hypopituitarism and hypoparathyroidism, associated with mutation in the gene encoding fatty acid synthase (FASN)
Gregory, L. C., Krywawych, S., Rahman, S., Lagos, C. F., Eaton, S. & Dattani, M. T., 2025, In: Metabolism. 168, 156256.Research output: Contribution to journal › Article › peer-review
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Alpha rhythm and Alzheimer's disease: Has Hans Berger's dream come true?
Babiloni, C., Arakaki, X., Baez, S., Barry, R. J., Benussi, A., Blinowska, K., Bonanni, L., Borroni, B., Bayard, J. B., Bruno, G., Cacciotti, A., Carducci, F., Carino, J., Carpi, M., Conte, A., Cruzat, J., D'Antonio, F., Della Penna, S., Del Percio, C. & De Sanctis, P. & 69 others, , 2025, In: Clinical Neurophysiology. 172, p. 33-50 18 p.Research output: Contribution to journal › Article › peer-review
1 Scopus citations -
Altered spatiotemporal brain dynamics of interoception in behavioural-variant frontotemporal dementia
Hazelton, J. L., Della Bella, G., Barttfeld, P., Dottori, M., Gonzalez-Gomez, R., Migeot, J., Moguilner, S., Legaz, A., Hernandez, H., Prado, P., Cuadros, J., Maito, M., Fraile-Vazquez, M., González Gadea, M. L., Çatal, Y., Miller, B., Piguet, O., Northoff, G. & Ibáñez, A., 2025, In: eBioMedicine. 113, 105614.Research output: Contribution to journal › Article › peer-review
Press/Media
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Eclipse foci, the international consortium seeking to project future pandemics
23/09/24
1 item of Media coverage
Press/Media
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Studies from Computational Biology Lab Describe New Findings in Molecular Science (Protein-Mediated Electroporation in a Cardiac Voltage-Sensing Domain Due to an nsPEF Stimulus)
Perez-Acle, T. O., Villanelo Lizana, F. A., Gárate Chateau, J. A. & Campos Pérez, L. E.
11/08/23
1 item of Media coverage
Press/Media
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Descifrando el lenguaje del cerebro: Un nuevo enfoque para el diagnóstico de enfermedades neurodegenerativas
11/07/23
1 Media contribution
Press/Media
Equipment
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Espectrofluorímetro Synergy H1
Oyarzun Cayo, P. A. (Manager), Díaz García, V. M. (Manager) & Oyarce Merino, K. A. (Manager)
Equipment/facility: Equipment
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Espectrofotómetro de Absorción Atómica con generador de hidrudos
Ñancucheo Cuevas, I. P. (Manager), Recio Sánchez, G. (Manager) & Oyarzún Cayo, P. A. (Manager)
Equipment/facility: Equipment
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Espectrofotómetro UV-VIS de microplacas y placa Take 3
Oyarzun Cayo, P. A. (Manager), Díaz García, V. M. (Manager) & Oyarce Merino, K. A. (Manager)
Equipment/facility: Equipment